{"id":17,"date":"2012-05-10T00:42:57","date_gmt":"2012-05-09T21:42:57","guid":{"rendered":"http:\/\/www.eng.biu.ac.il\/shefio\/?page_id=17"},"modified":"2017-11-19T13:18:31","modified_gmt":"2017-11-19T11:18:31","slug":"publications","status":"publish","type":"page","link":"https:\/\/www.eng.biu.ac.il\/shefio\/publications\/","title":{"rendered":"Publications"},"content":{"rendered":"<p><a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/05\/nalefd_v016i005.jpg\" class=\"thickbox no_icon\"><img loading=\"lazy\" decoding=\"async\" class=\" wp-image-419 alignleft\" src=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/05\/nalefd_v016i005.jpg\" alt=\"nalefd_v016i005.indd\" width=\"226\" height=\"300\" \/><\/a><img loading=\"lazy\" decoding=\"async\" class=\"wp-image-318 alignnone\" src=\"https:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/ACS_Chem_Neurosci_Cover_May_2014-226x300.jpg\" alt=\"web only. Editor: Jitesh Soares JEM: Diane\" width=\"226\" height=\"300\" \/><\/p>\n<ul>\n<li>Nissan I., Schori H., Kumar VB., Antman Passig M., Shefi O.*, and Gedanken H.* Topographical Impact of Silver Nanolines on the Morphology of Neuronal SH-SY5Y Cells,\u00a0<em>Journal of Materials Chemistry B<\/em>, - in press.<\/li>\n<li>Ofer N., Shefi O., and Yaari G. Branching morphology determines signal propagation dynamics in neurons, <em>Scientific Reports<\/em>, 7, 2017. <a href=\"http:\/\/rdcu.be\/u9WX\">pdf<\/a><\/li>\n<li>Marcus M., Baranes K., Park M., Choi I. S., Kang K.,Shefi O. Interactions of Neurons with Physical Environments. <em>Advanced Healthcare Materials<\/em>, 2017.<\/li>\n<li>Nissan I., Kumar VB., Porat Z., Makovec D., Shefi O., and Gedanken A., \u00a0The Sonochemically-Fabricated Ga@C-dots@Ga Nanoparticle-Aided Neural Growth,\u00a0<em>Journal of Materials Chemistry B<\/em>, doi: 10.1039\/C6TB02508K, 2017.<\/li>\n<li>Antman-Passig M., Levy S., Gartenberg C., Schori H. and Shefi O. Mechanically Oriented 3D Collagen Hydrogel for Directing Neurite Growth, <em>Tissue Engineering<\/em>, Part A,\u00a023(9-10), 403-414, 2017.<\/li>\n<li>Zilony N., Rosenberg M., Holzman L., Schori H., Shefi O., Segal E. Prolonged Controlled Delivery of Nerve Growth Factor Using Porous Silicon Nanostructures, <em>Journal of Controlled Release<\/em>, 257, 51-59, 2017.<\/li>\n<li>\n<div>Ilovitsh A., Polak P., Zalevsky Z., Shefi O. Selective inactivation of enzymes conjugated to nanoparticles using tuned laser illumination,\u00a0<em>Cytometry: Part A<\/em>, <span id=\"header-section-doi\" class=\"article-header__meta-info-label\">doi: <\/span><span class=\"article-header__meta-info-data\">10.1002\/cyto.a.23005,<\/span>\u00a02016. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/12\/Ilovitsh_et_al-2016-Cytometry_Part_A.pdf\">pdf<\/a><\/div>\n<\/li>\n<li>Nissan I., Schori H., Lipovsky A., Alon N., Gedanken A., Shefi O.\u00a0Effect of different densities of silver nanoparticles on neuronal growth,\u00a0<em>Journal of Nanoparticle Research<\/em>,\u00a018: 221, doi:\u00a010.1007\/s11051-016-3532-9, 2016. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/Effect-of-different-densities-Nissan-et-al.pdf\">pdf<\/a><\/li>\n<li>Marcus M., Karni M., Levy I., Baranes K., Alon N., Margel S., Shefi O.\u00a0Iron oxide nanoparticles for neuronal cell applications: uptake study and magnetic manipulations, <em>Journal of Nanobiotechnology<\/em>, doi:\u00a010.1186\/s12951-016-0190-0, 2016. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/11\/Iron-oxide-nanoparticles-Marcus.pdf\">pdf<\/a><\/li>\n<li>\n<div>Antman-Passig M., Shefi O. Remote magnetic orientation of 3D collagen hydrogels for directed\u00a0neuronal\u00a0regeneration,\u00a0<em>Nano Letters<\/em>\u00a0, doi: 10.1021\/acs.nanolett.6b00131 2016. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/03\/Enanolett.pdf\">pdf<\/a><\/div>\n<\/li>\n<li>\n<div>Even D. Y., Kedmi A., Basch-Barzilay S., Ideses D., Tikotzki R., Shir-Shapira H., Shefi O. and Juven-Gershon T.\u00a0Engineered promoters for potent transient overexpression,\u00a0<em>Plos One<\/em>, 2016. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/11\/journal.pone_.0148918.pdf\">pdf<\/a><\/div>\n<\/li>\n<li>Baranes K., Shevach M., Shefi O.*, and Dvir T.* Gold nanoparticle-decorated scaffolds promote neuronal differentiation and maturation,\u00a0<em>Nano Letters<\/em>, doi:\u00a010.1021\/acs.nanolett.5b04033.\u00a0*corresponding author <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/11\/Gold-Nanoparticle-Decorated-Scaffolds-Promote-Neuronal.pdf\">pdf<\/a><\/li>\n<li>Ofer N. and Shefi O. Axonal geometry as a tool for modulating firing patterns, <em>Applied Mathematical Modelling<\/em>, 40(4):\u00a03175\u20133184, doi:10.1016\/j.apm.2015.10.017 2016. \u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/02\/1-s2.0-S0307904X15006757-main.pdf\">pdf<\/a><\/li>\n<li>Alon N., Havdala T., Skaat H., Baranes K., Marcus M., Levy I., Margel S., Sharoni A. and Shefi O. Magnetic micro-device for manipulating PC12 cells migration and organization, <i>Lab on a Chip<\/i>, doi: 10.1039\/C5LC00035A 2015. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/C5LC00035A.pdf\">pdf<\/a><\/li>\n<li>Hibsh D., Schori H., Efroni S. and Shefi O. De novo transcriptome assembly databases for the central nervous system of the medicinal leech, <em>Scientific Data<\/em> \u2013 2015.\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2015\/10\/sdata201515.pdf\">pdf<\/a><\/li>\n<li>Polak P. and Shefi O. Nanometric agents in the service of neuroscience: manipulation of neuronal growth and activity using nanoparticles, <em>Nanomedicine: Nanotechnology, Biology, and Medicine<\/em> doi:10.1016\/j.nano.2015.03.005 2015. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2016\/11\/1-s2.0-S1549963415000799-main.pdf\">pdf<\/a><\/li>\n<li><span lang=\"DE\">Schwartz S.<\/span><span lang=\"DE\">, Fixler D.<\/span><span lang=\"DE\">, Popovtzer R.<\/span><span lang=\"DE\"><span style=\"font-family: 'Cambria Math', serif\">\u00a0<\/span><\/span><span lang=\"DE\">and Shefi O.\u00a0<\/span>Fluorescence life-time imaging and steady state polarization for examining binding of fluorophores to gold nanoparticles,\u00a0<em>Journal of Biophotonics<\/em>,\u00a08(11\u201312): 944\u2013951, doi: 10.1002\/jbio.201400136 2015. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/jbio201400136d-4c-944-951.pdf\">pdf<\/a><\/li>\n<li>\n<div>Alon N.,\u00a0Duadi H.,\u00a0Cohen O.,\u00a0Samet T.,\u00a0Zilony N.,\u00a0Schori H.,\u00a0Shefi O. and\u00a0Zalevsky Z.\u00a0Promotion of Neural Sprouting Using Low Level Green LED Phototherapy,\u00a0<em>Journal of Biomedical Optics<\/em>,\u00a020(2):20502. doi: 10.1117\/1.JBO.20.2.020502 2015.\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/JBO_20_2_020502.pdf\">pdf<\/a><\/div>\n<\/li>\n<li>Marcus M., Skaat H., Alon N., Margel S., Shefi O.\u00a0NGF-conjugated iron oxide nanoparticles promote differentiation and outgrowth of PC12 cells,\u00a0<em>Nanoscale<\/em> 7:1058-1066, 2015.\u00a0 <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/Nanoscale_MichalMarcus_2015.pdf\">pdf<\/a><\/li>\n<li><span style=\"color: #222222\">Baranes K., Moshe H., Alon N., Schwartz S. and Shefi O. Neuronal growth on L- and D- cysteine self-assembled monolayers reveals neuronal chiral sensitivity, <em>ACS Chemical Neuroscience<\/em>, 5(5):370-376, 2014<\/span>. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/Baranes_et_al._2014.pdf\">pdf<\/a><\/li>\n<li><span style=\"color: #222222\">Hibsh D., Schori H., Efroni S., Shefi, O. Spatial regulation dominates gene function in the ganglia chain, <em>Bioinformatics<\/em>, 30(3):310-6, 2014<\/span>. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2014\/02\/Bioinformatics-2014-Hibsh.pdf\">pdf<\/a><\/li>\n<li>\n<div>Zilony N., Tzur-Balter A., Segal E., Shefi O. Bombarding Cancer: Biolistic delivery of therapeutics using Porous Si Carriers,\u00a0<em>Scientific Reports<\/em>, <i>Reports\u00a0<\/i>3, Article number:2499, 2013.\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/SR_zilony.pdf\">pdf<\/a><\/div>\n<\/li>\n<li>Alon N., Miroshnikov Y., Perkas N., Nissan I., Gedanken A. and Shefi O. Substrates coated with silver nanoparticles as a neuronal\u00a0regenerative material,\u00a0<em>International Journal of Nanomedicine<\/em>, 9: 23-31, 2014.\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/Substrates-coated-with-silver-nanoparticles.pdf\">pdf<\/a><\/li>\n<li>Polak P., Zalevsky Z. and Shefi O. Gold nanoparticles-based biosensing of single nucleotide DNA mutations,\u00a0<i>International Journal of Biological Macromolecules<\/i>, 59:134-137, 2013. <a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/gold-np-based-biosensing-of-single-nucleotide-dna-mutations.pdf\">pdf<\/a><\/li>\n<li>Karni M., Zedon D., Polak P., Zalevsky Z. and Shefi O., Thermal Degradation of DNA,\u00a0<i>DNA and Cell Biology<\/i>, 32(6): 298-301,\u00a02013.\u00a0<a title=\"thermal degradation of dna\" href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/thermal-degradation-of-dna.pdf\">pdf<\/a><\/li>\n<li>Baranes K., Kollmar D., Chejanovsky N., Sharoni A. and Shefi O. Interactions of neurons with topographic nano cues affect branching morphology mimicking neuron-neuron interactions,\u00a0<em>Journal of Molecular Histology<\/em>, 43(4):437-447,\u00a02012.\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/Baranes-et-al.-2012b2.pdf\">pdf<\/a><\/li>\n<li>Baranes K., Chejanovsky N., Alon N., Sharoni A. and Shefi O. Topographic cues of nano-scale height direct neuronal growth pattern,\u00a0<em>Biotechnology and Bioengineering,\u00a0<\/em>109(7):1791-1797,\u00a02012.\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/shefio\/files\/2012\/05\/Baranes_et_al._20121.pdf\">pdf<\/a><\/li>\n<li>Shefi O., Simonnet C., Groisman A. and Macagno E.,\u00a0Localized RNAi and ectopic gene expression in the medicinal leech,\u00a0<em>Journal of visualized experiments 14,<\/em>2008,\u00a0\u00a0<a href=\"http:\/\/www.jove.com\/index\/Details.stp?ID=697\">Video<\/a><\/li>\n<li>Shefi O., Simonnet C., Baker M.W., Glass J.R., Macagno R.E. and Groisman A., Microtargeted gene silencing and ectopic expression in live embryos using biolistic delivery with a pneumatic capillary gun,\u00a0<em>Journal of Neuroscience<\/em>\u00a026(23): 6119-6123, 2006,\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/~shefio\/publications\/Shefietal2006JNeurosci.pdf\">pdf<\/a><\/li>\n<li>Shefi O., Golobovitz S., Ben Jacob E. and Ayali A., A two-phase growth strategy in cultured neuronal networks as reflected by the distribution of neurite branching angles,\u00a0<em>Journal\u00a0\u00a0of Neurobiol<\/em>ogy 62(3): 361-368, 2004,\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/~shefio\/publications\/Shefietal2004Jneurobiol.pdf\">pdf<\/a><\/li>\n<li>Ayali A., Fuchs E., Zilberstein Y., Robinson A., Shefi O., Hulata E. , Baruchi I., and Ben-Jacob E.,\u00a0 Contextual regularity and complexity of neuronal activity: from stand-alone cultures to task-performing animals,\u00a0\u00a0<em>Complexit<\/em>y\u00a0 9(6): 25-32, 2004<\/li>\n<li>Shefi O., Harel A., Chklovskii D.B., Ben-Jacob E. and Ayali A., Biophysical constraints on neuronal branching,\u00a0<em>Neurocomputing<\/em>\u00a058-60C: 487-495, 2004,\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/~shefio\/publications\/Shefietal2004Neurocopt.pdf\">pdf<\/a><\/li>\n<li>Shefi O., Golding, I. Segev, R. Ben-Jacob, E. and Ayali, A., Morphological characterization of\u00a0<em>in vitro<\/em>\u00a0neuronal networks,\u00a0<em>Physical Review E<\/em>\u00a066: 021905.\u00a0\u00a0Also highlighted in the Virtual Journal of Biol. Physics Research,\u00a04(4), 2002,\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/~shefio\/publications\/Shefietal2002PRE.pdf\">pdf<\/a><\/li>\n<li>Shefi O., Ben-Jacob E. and Ayali A., Growth morphology of two-dimensional insect neural networks,\u00a0<em>Neurocomputing<\/em>\u00a044-46: 635-643, 2002,\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/~shefio\/publications\/Shefietal2002Neurocompt.pdf\">pdf<\/a><\/li>\n<li>Shefi O., Davidson S., Maayan A. and Akselrod S., The effect of thermal stimulation on the heart-rate variability in neonates,\u00a0<em>Early Human Development<\/em>\u00a052: (1) 49-66, 28, 1998,\u00a0\u00a0<a href=\"http:\/\/www.eng.biu.ac.il\/~shefio\/publications\/Shefietal1998EarlyHumDev.pdf\">pdf<\/a><\/li>\n<li>Davidson S., Reina N., Shefi O., Hai-Tov U. and Akselrod S. Spectral analysis of heart rate fluctuations and optimum thermal management for low birth weight infants.\u00a0\u00a0<em>Med Biol Eng Comput<\/em>\u00a035: (6) 619-625, 1997<\/li>\n<\/ul>\n<p>&nbsp;<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Nissan I., Schori H., Kumar VB., Antman Passig M., Shefi O.*, and Gedanken H.* Topographical Impact of Silver Nanolines on the Morphology of Neuronal SH-SY5Y Cells,\u00a0Journal of Materials Chemistry B, &#8211; in press. Ofer N., Shefi O., and Yaari G. Branching morphology determines signal propagation dynamics in neurons, Scientific Reports, 7, 2017. pdf Marcus M., &hellip; <a href=\"https:\/\/www.eng.biu.ac.il\/shefio\/publications\/\" class=\"more-link\">Continue reading <span class=\"screen-reader-text\">Publications<\/span> <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"open","template":"","meta":{"footnotes":""},"class_list":["post-17","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/pages\/17"}],"collection":[{"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/comments?post=17"}],"version-history":[{"count":71,"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/pages\/17\/revisions"}],"predecessor-version":[{"id":472,"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/pages\/17\/revisions\/472"}],"wp:attachment":[{"href":"https:\/\/www.eng.biu.ac.il\/shefio\/wp-json\/wp\/v2\/media?parent=17"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}